Transcript: ENST00000369304.3 ITGA10-001

Description

integrin, alpha 10 [Source:HGNC Symbol;Acc:6135]

Gene Synonyms

PRO827

Location

About this transcript

This transcript has 30 exons, is annotated with 49 domains and features, is associated with 9449 variant alleles and maps to 901 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369304.3	ITGA10-001	5269	1167aa	ENSP00000358310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS918	O75578	NM_003637.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538811.1	ITGA10-201	3479	1036aa	ENSP00000440011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539363.1	ITGA10-202	3380	1024aa	ENSP00000439894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2RTV5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481236.1	ITGA10-003	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468261.1	ITGA10-002	1438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 5,269 bps, Translation length: 1,167 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75578

CCDS

This transcript is a member of the Human CCDS set: CCDS918

Version

ENST00000369304.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000038537 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.