Transcript: ENST00000472410.1 MAP3K6-002

Description

mitogen-activated protein kinase kinase kinase 6 [Source:HGNC Symbol;Acc:6858]

Gene Synonyms

ASK2, MAPKKK6, MEKK6

Location

Chromosome 1: 27,681,675-27,690,442 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 17 domains and features, is associated with 4872 variant alleles and maps to 578 oligo probes.

Gene

This transcript is a product of gene ENSG00000142733.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374040.3	MAP3K6-008	4309	1280aa	ENSP00000363152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95382 Q32MQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493901.1	MAP3K6-001	4309	1288aa	ENSP00000419591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS299	O95382 Q32MQ5	NM_004672.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357582.2	MAP3K6-007	4136	1288aa	ENSP00000350195.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS299	O95382 Q32MQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472410.1	MAP3K6-002	2530	798aa	ENSP00000418731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q32MQ5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486046.1	MAP3K6-006	444	82aa	ENSP00000418932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470890.1	MAP3K6-004	956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476509.1	MAP3K6-005	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495230.1	MAP3K6-003	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,530 bps, Translation length: 798 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000472410.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000013470 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000472410.1 MAP3K6-002

Summary