Transcript: ENST00000322914.3 TMC6-002

Description

transmembrane channel-like 6 [Source:HGNC Symbol;Acc:18021]

Gene Synonyms

EV1, EVER1, EVIN1, LAK-4P

Location

Chromosome 17: 76,109,002-76,128,488 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 18 domains and features, is associated with 11971 variant alleles and maps to 644 oligo probes.

Gene

This transcript is a product of gene ENSG00000141524.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000590602.1	TMC6-007	5268	805aa	ENSP00000465261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32748	K7ENC4 K7ENM6 K7ERH0 Q7L2M4 Q7Z403 Q96I77	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392467.3	TMC6-001	2833	805aa	ENSP00000376260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32748	K7ENC4 K7ENM6 K7ERH0 Q7L2M4 Q7Z403 Q96I77	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322914.3	TMC6-002	2786	805aa	ENSP00000313408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32748	K7ENC4 K7ENM6 K7ERH0 Q7L2M4 Q7Z403 Q96I77	NM_007267.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322933.4	TMC6-201	2711	384aa	ENSP00000313479.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z403	NM_001127198.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589553.1	TMC6-003	2389	298aa	ENSP00000465359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z403	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306591.7	TMC6-026	1681	454aa	ENSP00000306405.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENC4 K7ENM6 K7ERH0 Q7Z403	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591436.1	TMC6-009	1155	384aa	ENSP00000464853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z403	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589271.1	TMC6-015	1099	285aa	ENSP00000468255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENC4 K7ENM6 K7ERH0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592063.1	TMC6-016	743	153aa	ENSP00000466885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENC4 K7ENM6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592594.1	TMC6-010	551	143aa	ENSP00000467016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENM6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586126.1	TMC6-011	821	41aa	ENSP00000466159.1	Nonsense mediated decay		K7ELP1	-	-
ENST00000592076.1	TMC6-021	693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590934.1	TMC6-022	386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587480.1	TMC6-014	253	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593044.1	TMC6-004	3070	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588087.1	TMC6-006	2384	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586271.1	TMC6-008	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588792.1	TMC6-005	843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590494.1	TMC6-025	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591594.1	TMC6-020	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589933.1	TMC6-024	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586697.1	TMC6-017	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585849.1	TMC6-018	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590162.1	TMC6-013	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591756.1	TMC6-023	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,786 bps, Translation length: 805 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z403

CCDS

This transcript is a member of the Human CCDS set: CCDS32748

Version

ENST00000322914.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437046 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000322914.3 TMC6-002

Summary