Transcript: ENST00000571207.1 MINK1-006

Description

misshapen-like kinase 1 [Source:HGNC Symbol;Acc:17565]

Gene Synonyms

B55, MAP4K6, MINK, YSK2, ZC3, hMINK, hMINKbeta

Location

Chromosome 17: 4,787,764-4,801,356 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 15 domains and features, is associated with 8537 variant alleles and maps to 982 oligo probes.

Gene

This transcript is a product of gene ENSG00000141503.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355280.6	MINK1-001	4961	1332aa	ENSP00000347427.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45588	Q8N4C8 Q8NG69 Q9HBM9	NM_153827.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347992.7	MINK1-002	4863	1303aa	ENSP00000269296.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45589	Q8N4C8 Q8NG69 Q9HBM9	NM_170663.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453408.3	MINK1-003	3939	1312aa	ENSP00000406487.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45590	Q8N4C8 Q8NG69 Q9HBM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576037.1	MINK1-014	770	161aa	ENSP00000459102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1U1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574453.1	MINK1-005	4941	111aa	ENSP00000461500.1	Nonsense mediated decay		I3L4T2	-	-
ENST00000571207.1	MINK1-006	4569	381aa	ENSP00000459699.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000577021.1	MINK1-009	675	53aa	ENSP00000459269.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572330.1	MINK1-004	5299	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574871.1	MINK1-008	3150	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572629.1	MINK1-010	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575511.1	MINK1-013	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572304.1	MINK1-012	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571526.1	MINK1-011	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 10, Transcript length: 4,569 bps, Translation length: 381 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000571207.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439807 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000571207.1 MINK1-006

Summary