Transcript: ENST00000498311.1 WRAP53-003

Description

WD repeat containing, antisense to TP53 [Source:HGNC Symbol;Acc:25522]

Gene Synonyms

DKCB3, FLJ10385, TCAB1, WDR79

Location

Chromosome 17: 7,590,918-7,606,819 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 8544 variant alleles and maps to 544 oligo probes.

Gene

This transcript is a product of gene ENSG00000141499.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316024.5	WRAP53-001	4011	548aa	ENSP00000324203.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11119	C6ZGR0 Q9BUR4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396463.2	WRAP53-002	1905	548aa	ENSP00000379727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11119	C6ZGR0 Q9BUR4	NM_018081.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457584.2	WRAP53-009	1828	548aa	ENSP00000411061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11119	C6ZGR0 Q9BUR4	NM_001143991.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431639.2	WRAP53-008	1818	548aa	ENSP00000397219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11119	C6ZGR0 Q9BUR4	NM_001143990.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534050.1	WRAP53-010	1736	515aa	ENSP00000434999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498311.1	WRAP53-003	2657	287aa	ENSP00000432991.1	Nonsense mediated decay		C6ZGR0 E9PMR3	-	-
ENST00000463804.2	WRAP53-005	504	46aa	ENSP00000465025.1	Nonsense mediated decay		K7EJ50	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000467699.1	WRAP53-004	2525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471973.2	WRAP53-006	998	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498114.1	WRAP53-007	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 6, Transcript length: 2,657 bps, Translation length: 287 residues

Version

ENST00000498311.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259387 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000498311.1 WRAP53-003

Summary