Transcript: ENST00000579237.1 MYOCD-007

Description

myocardin [Source:HGNC Symbol;Acc:16067]

Gene Synonyms

MYCD

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 20978 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000425538.1	MYOCD-001	8466	986aa	ENSP00000401678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54091	Q8IZQ8	NM_153604.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443061.1	MYOCD-005	3632	648aa	ENSP00000400148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6N065	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000343344.4	MYOCD-004	2817	938aa	ENSP00000341835.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11163	Q8IZQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579237.1	MYOCD-007	565	41aa	ENSP00000462694.1	Nonsense mediated decay		J3KSX3	-	-
ENST00000395988.1	MYOCD-002	2344	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 565 bps, Translation length: 41 residues

Version

ENST00000579237.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441562 (version 1)