Transcript: ENST00000315082.4 RHOT2-001

Description

ras homolog family member T2 [Source:HGNC Symbol;Acc:21169]

Gene Synonyms

ARHT2, C16orf39, MIRO-2, MIRO2, RASL

Location

Chromosome 16: 718,086-724,174 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 30 domains and features, is associated with 5179 variant alleles and maps to 709 oligo probes.

Gene

This transcript is a product of gene ENSG00000140983.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315082.4	RHOT2-001	2539	618aa	ENSP00000321971.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10417	Q8IXI1	NM_138769.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563134.1	RHOT2-024	736	214aa	ENSP00000459564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2C6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561929.1	RHOT2-014	625	208aa	ENSP00000456855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BST5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000569197.2	RHOT2-021	530	155aa	ENSP00000457437.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562333.1	RHOT2-017	1052	135aa	ENSP00000457852.1	Nonsense mediated decay		H3BUX4	-	-
ENST00000561983.1	RHOT2-018	1044	135aa	ENSP00000454307.1	Nonsense mediated decay		H3BUX4	-	-
ENST00000563637.1	RHOT2-013	993	72aa	ENSP00000458136.1	Nonsense mediated decay		H3BVI5	-	-
ENST00000570280.1	RHOT2-015	708	55aa	ENSP00000454486.1	Nonsense mediated decay		H3BMP9	-	-
ENST00000566214.1	RHOT2-007	683	80aa	ENSP00000455138.1	Nonsense mediated decay		H3BP40	-	-
ENST00000569943.2	RHOT2-012	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602564.1	RHOT2-028	3695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568636.1	RHOT2-004	3098	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569675.1	RHOT2-002	2559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568950.1	RHOT2-020	1343	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569358.1	RHOT2-022	1273	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567017.1	RHOT2-005	1094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565004.1	RHOT2-025	1014	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563776.2	RHOT2-027	923	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566965.1	RHOT2-006	879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564659.1	RHOT2-023	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570092.1	RHOT2-009	674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562708.1	RHOT2-008	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561711.1	RHOT2-011	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562598.1	RHOT2-016	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569706.1	RHOT2-010	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567589.1	RHOT2-026	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562957.1	RHOT2-019	397	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,539 bps, Translation length: 618 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXI1

CCDS

This transcript is a member of the Human CCDS set: CCDS10417

Version

ENST00000315082.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000241617 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000315082.4 RHOT2-001

Summary