Transcript: ENST00000397992.5 ZFHX3-002

Description

zinc finger homeobox 3 [Source:HGNC Symbol;Acc:777]

Gene Synonyms

ATBF1, ATBT, ZNF927

Location

About this transcript

This transcript has 9 exons, is annotated with 105 domains and features, is associated with 141886 variant alleles and maps to 762 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268489.5	ZFHX3-001	16064	3703aa	ENSP00000268489.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10908	Q15911 Q6TCJ2	NM_006885.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397992.5	ZFHX3-002	13841	2789aa	ENSP00000438926.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54035	Q15911	NM_001164766.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558842.1	ZFHX3-004	240	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563625.1	ZFHX3-003	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 13,841 bps, Translation length: 2,789 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15911

CCDS

This transcript is a member of the Human CCDS set: CCDS54035

Version

ENST00000397992.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000419115 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.