Transcript: ENST00000457010.2 ARMC5-002

Description

armadillo repeat containing 5 [Source:HGNC Symbol;Acc:25781]

Gene Synonyms

FLJ13063

Location

Chromosome 16: 31,470,145-31,478,487 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 5050 variant alleles and maps to 552 oligo probes.

Gene

This transcript is a product of gene ENSG00000140691.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000457010.2	ARMC5-002	4844	725aa	ENSP00000399561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42155	Q96C12	NM_024742.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408912.3	ARMC5-001	3626	1030aa	ENSP00000386125.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQ26	NM_001288767.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268314.4	ARMC5-201	3612	935aa	ENSP00000268314.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45472	Q96C12	NM_001105247.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563544.1	ARMC5-003	3549	935aa	ENSP00000456877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45472	Q96C12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538189.1	ARMC5-203	3454	967aa	ENSP00000443995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H156	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564900.1	ARMC5-004	2072	598aa	ENSP00000456571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMQ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412665.2	ARMC5-202	2072	579aa	ENSP00000400183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564514.2	ARMC5-006	586	10aa	ENSP00000454430.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570119.2	ARMC5-007	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,844 bps, Translation length: 725 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96C12

CCDS

This transcript is a member of the Human CCDS set: CCDS42155

Version

ENST00000457010.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432846 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000457010.2 ARMC5-002

Summary