Transcript: ENST00000518287.2 NCOA2-002

Description

nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:7669]

Gene Synonyms

BHLHE75, GRIP1, KAT13C, NCoA-2, SRC2, TIF2, bHLHe75

Location

Chromosome 8: 71,024,305-71,314,314 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 23 domains and features, is associated with 121482 variant alleles and maps to 870 oligo probes.

Gene

This transcript is a product of gene ENSG00000140396.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000452400.2	NCOA2-001	8447	1464aa	ENSP00000399968.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47872	Q15596	NM_006540.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518363.2	NCOA2-005	1834	590aa	ENSP00000429132.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WAJ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000267974.4	NCOA2-201	1760	552aa	ENSP00000267974.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WAJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520416.1	NCOA2-003	526	8aa	ENSP00000430850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519724.1	NCOA2-004	438	16aa	ENSP00000430348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518287.2	NCOA2-002	6087	946aa	ENSP00000430148.2	Nonsense mediated decay		E7EWM1	-	-
ENST00000524223.1	NCOA2-008	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521239.1	NCOA2-007	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522054.1	NCOA2-006	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 12, Transcript length: 6,087 bps, Translation length: 946 residues

Version

ENST00000518287.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379697 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000518287.2 NCOA2-002

Summary