Transcript: ENST00000558012.1 PSTPIP1-001

Description

proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:9580]

Gene Synonyms

CD2BP1, CD2BP1L, CD2BP1S, H-PIP, PAPAS, PSTPIP

Location

Chromosome 15: 77,287,426-77,329,673 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 22 domains and features, is associated with 20536 variant alleles and maps to 470 oligo probes.

Gene

This transcript is a product of gene ENSG00000140368.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000558012.1	PSTPIP1-001	1896	416aa	ENSP00000452746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45312	O43586	NM_003978.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379595.3	PSTPIP1-002	1840	413aa	ENSP00000368914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000267939.5	PSTPIP1-201	1798	396aa	ENSP00000267939.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K004	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559295.1	PSTPIP1-009	1349	397aa	ENSP00000452743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K004 O43586	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559161.1	PSTPIP1-017	781	208aa	ENSP00000453372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559856.1	PSTPIP1-015	756	252aa	ENSP00000453382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLX8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558407.1	PSTPIP1-012	656	175aa	ENSP00000453268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559859.1	PSTPIP1-013	611	145aa	ENSP00000453218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558870.1	PSTPIP1-010	556	133aa	ENSP00000452779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560223.1	PSTPIP1-004	1962	38aa	ENSP00000454118.1	Nonsense mediated decay		H0YNR2	-	-
ENST00000559785.1	PSTPIP1-003	1715	417aa	ENSP00000452986.1	Nonsense mediated decay		H0YKY3 H0YLM9	-	-
ENST00000559750.1	PSTPIP1-006	1678	136aa	ENSP00000453531.1	Nonsense mediated decay		B4E1Z9	-	-
ENST00000560796.1	PSTPIP1-008	966	101aa	ENSP00000454127.1	Nonsense mediated decay		H0YNS1	-	-
ENST00000557995.1	PSTPIP1-011	1052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560621.1	PSTPIP1-018	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560377.1	PSTPIP1-007	1548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559795.1	PSTPIP1-005	1075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561315.1	PSTPIP1-014	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560064.1	PSTPIP1-016	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,896 bps, Translation length: 416 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43586

CCDS

This transcript is a member of the Human CCDS set: CCDS45312

Version

ENST00000558012.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000419373 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000558012.1 PSTPIP1-001

Summary