Transcript: ENST00000560039.1 NIPA2-009

Description

non imprinted in Prader-Willi/Angelman syndrome 2 [Source:HGNC Symbol;Acc:17044]

Location

Chromosome 15: 23,019,819-23,034,378 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 8249 variant alleles and maps to 109 oligo probes.

Gene

This transcript is a product of gene ENSG00000140157.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337451.3	NIPA2-001	3233	360aa	ENSP00000337618.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10010	H0YMQ7 Q8N8Q9	NM_030922.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398014.2	NIPA2-201	3130	360aa	ENSP00000381096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10010	H0YMQ7 Q8N8Q9	NM_001008860.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398013.3	NIPA2-003	2280	360aa	ENSP00000381095.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10010	H0YMQ7 Q8N8Q9	NM_001008892.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359727.4	NIPA2-002	1531	341aa	ENSP00000352762.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32174	Q8N8Q9	NM_001184888.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539711.2	NIPA2-004	1412	341aa	ENSP00000437746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32174	Q8N8Q9	NM_001008894.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560039.1	NIPA2-009	554	59aa	ENSP00000453700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMQ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559571.1	NIPA2-007	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560205.1	NIPA2-006	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561072.1	NIPA2-008	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560762.1	NIPA2-005	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 554 bps, Translation length: 59 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000560039.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415643 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000560039.1 NIPA2-009

Summary