Transcript: ENST00000320516.4 CCDC65-001

Description

coiled-coil domain containing 65 [Source:HGNC Symbol;Acc:29937]

Gene Synonyms

CILD27, FAP250, FLJ35732, NYD-SP28

Location

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 8434 variant alleles and maps to 344 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266984.5	CCDC65-002	2084	497aa	ENSP00000266984.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IXS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320516.4	CCDC65-001	1775	484aa	ENSP00000312706.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8772	B4DXQ7 Q8IXS2	NM_033124.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552942.1	CCDC65-005	1338	373aa	ENSP00000446569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547861.1	CCDC65-004	1746	42aa	ENSP00000447157.1	Nonsense mediated decay		F8W0R6	-	-
ENST00000552188.1	CCDC65-003	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,775 bps, Translation length: 484 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXS2

CCDS

This transcript is a member of the Human CCDS set: CCDS8772

Version

ENST00000320516.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408922 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.