Transcript: ENST00000544191.1 ETNK1-003

Description

ethanolamine kinase 1 [Source:HGNC Symbol;Acc:24649]

Gene Synonyms

EKI, EKI 1, EKI1, Nbla10396

Location

Chromosome 12: 22,824,020-22,837,485 forward strand.

About this transcript

This transcript has 3 exons, is associated with 5592 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSG00000139163.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266517.4	ETNK1-001	7159	452aa	ENSP00000266517.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8698	Q9HBU6	NM_018638.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538218.1	ETNK1-006	1659	425aa	ENSP00000446292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q659C5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000335148.3	ETNK1-002	1083	258aa	ENSP00000334041.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41760	Q86U68 Q9HBU6	NM_001039481.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545979.1	ETNK1-005	617	82aa	ENSP00000439614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544191.1	ETNK1-003	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539974.1	ETNK1-004	441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 500 bps,

Version

ENST00000544191.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401931 (version 1)

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Transcript: ENST00000544191.1 ETNK1-003

Summary