Transcript: ENST00000542983.1 FAM60A-007

Description

family with sequence similarity 60, member A [Source:HGNC Symbol;Acc:30702]

Gene Synonyms

C12orf14, TERA

Location

Chromosome 12: 31,435,622-31,479,133 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 18652 variant alleles and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSG00000139146.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337682.4	FAM60A-001	3163	221aa	ENSP00000337477.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8723	B7Z287 F5GZ82 F5H6U2 Q9NP50	NM_001135812.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539409.1	FAM60A-002	2532	73aa	ENSP00000443697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NP50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454658.2	FAM60A-004	1555	221aa	ENSP00000393279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8723	B7Z287 F5GZ82 F5H6U2 Q9NP50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395766.1	FAM60A-201	1355	73aa	ENSP00000379115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NP50	NM_021238.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542983.1	FAM60A-007	738	73aa	ENSP00000439952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NP50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543615.1	FAM60A-008	669	126aa	ENSP00000437363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6U2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539004.1	FAM60A-006	459	134aa	ENSP00000443881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ82 F5H6U2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544921.1	FAM60A-009	845	59aa	ENSP00000443087.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536836.1	FAM60A-005	1734	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000448582.2	FAM60A-003	3111	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 738 bps, Translation length: 73 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NP50

Version

ENST00000542983.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400350 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000542983.1 FAM60A-007

Summary