Transcript: ENST00000503392.1 EGF-003

Description

epidermal growth factor [Source:HGNC Symbol;Acc:3229]

Gene Synonyms

HOMG4, URG

Location

Chromosome 4: 110,834,397-110,932,657 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 82 domains and features, is associated with 40611 variant alleles and maps to 563 oligo probes.

Gene

This transcript is a product of gene ENSG00000138798.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265171.5	EGF-001	4880	1207aa	ENSP00000265171.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3689	P01133 Q6QBS2	NM_001963.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509793.1	EGF-002	4489	1165aa	ENSP00000424316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54795	P01133 Q6QBS2	NM_001178131.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503392.1	EGF-003	3642	1166aa	ENSP00000421384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54794	P01133 Q6QBS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502723.1	EGF-005	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541061.1	EGF-012	432	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509996.1	EGF-004	1464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544918.1	EGF-006	773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504633.1	EGF-007	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502579.1	EGF-008	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511228.1	EGF-009	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537316.1	EGF-011	491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540840.1	EGF-010	324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,642 bps, Translation length: 1,166 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01133

CCDS

This transcript is a member of the Human CCDS set: CCDS54794

Version

ENST00000503392.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000363799 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000503392.1 EGF-003

Summary