Human (GRCh37.p13)
Description

calcium responsive transcription factor [Source:HGNC Symbol;Acc:14435]

Gene Synonyms

ALS2CR8, CaRF, FLJ21579, NYD-SP24

About this transcript

This transcript has 16 exons, is annotated with 5 domains and features, is associated with 18859 variant alleles and maps to 791 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000402905.3CARF-0015938725aaENSP00000384006.2
 
Protein coding
CCDS42801C9JBK9 C9JCD6 C9JI92
C9JL40 C9JSN4 C9JT99
C9JZ91 C9JZI6 Q8N187
NM_001282912.1GENCODE basic
ENST00000320443.8CARF-2015934725aaENSP00000316224.8
 
Protein coding
CCDS42801C9JBK9 C9JCD6 C9JI92
C9JL40 C9JSN4 C9JT99
C9JZ91 C9JZI6 Q8N187
-GENCODE basic
ENST00000438828.2CARF-0023574725aaENSP00000414644.1
 
Protein coding
CCDS42801C9JBK9 C9JCD6 C9JI92
C9JL40 C9JSN4 C9JT99
C9JZ91 C9JZI6 Q8N187
NM_024744.14GENCODE basic
ENST00000444724.1CARF-0082854309aaENSP00000416812.1
 
Protein coding
C9JBK9 C9JCD6 C9JL40
C9JSN4 C9JT99 C9JZ91
C9JZI6 F6SXV3
-GENCODE basic
ENST00000545262.1CARF-2042770649aaENSP00000440467.1
 
Protein coding
CCDS63091C9JI92 C9JN29 C9JSN4
G3V1K7
-GENCODE basic
ENST00000428585.1CARF-0052513649aaENSP00000396221.1
 
Protein coding
CCDS63091C9JI92 C9JN29 C9JSN4
G3V1K7
-GENCODE basic
ENST00000414439.1CARF-0042099623aaENSP00000416160.1
 
Protein coding
C9JI92 -GENCODE basic
ENST00000545253.1CARF-2032099637aaENSP00000439769.1
 
Protein coding
B4DIA7 C9JI92 -GENCODE basic
ENST00000434998.1CARF-0071955207aaENSP00000415948.1
 
Protein coding
Q8N187 -GENCODE basic
ENST00000456821.2CARF-2021136207aaENSP00000411134.2
 
Protein coding
B4DIN8 C9JCD6 C9JL40
F8WDW1
-GENCODE basic
ENST00000414857.1CARF-010726131aaENSP00000391617.1
 
Protein coding
C9JBK9 C9JCD6 C9JL40
C9JSN4 C9JT99 C9JZ91
C9JZI6
-CDS 3' incomplete
ENST00000443740.1CARF-01959795aaENSP00000387785.1
 
Protein coding
C9JL40 C9JSN4 C9JT99
C9JZ91 C9JZI6
-CDS 3' incomplete
ENST00000432024.1CARF-01759573aaENSP00000413166.1
 
Protein coding
C9JL40 C9JSN4 C9JT99
C9JZ91
-CDS 3' incomplete
ENST00000431787.1CARF-00959492aaENSP00000395276.1
 
Protein coding
C9JCD6 C9JL40 -CDS 3' incomplete
ENST00000414490.1CARF-01457554aaENSP00000413296.1
 
Protein coding
C9JSN4 C9JZ91 -CDS 3' incomplete
ENST00000441569.1CARF-01857272aaENSP00000401918.1
 
Protein coding
C9JL40 C9JSN4 C9JT99
C9JZ91
-CDS 3' incomplete
ENST00000447539.1CARF-01157280aaENSP00000394990.1
 
Protein coding
C9JN29 C9JSN4 -CDS 3' incomplete
ENST00000430899.1CARF-01553721aaENSP00000394298.1
 
Protein coding
C9JSN4 -CDS 3' incomplete
ENST00000445120.1CARF-01646038aaENSP00000408998.1
 
Protein coding
C9JL40 -CDS 3' incomplete
ENST00000422368.1CARF-0031592419aaENSP00000392274.1
 
Nonsense mediated decay
C9JCD6 C9JL40 F8WC01
--
ENST00000457031.1CARF-0061136189aaENSP00000414789.1
 
Nonsense mediated decay
C9JCD6 C9JL40 F8WDW1
--
ENST00000427712.1CARF-01294333aaENSP00000409985.1
 
Nonsense mediated decay
C9JSN4 F8WDH0 --
ENST00000471271.1CARF-013929No protein-
 
Processed transcript
---
Statistics

Exons: 16, Coding exons: 14, Transcript length: 5,938 bps, Translation length: 725 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N187

CCDS

This transcript is a member of the Human CCDS set: CCDS42801

Version

ENST00000402905.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000335768 (version 5)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.