Transcript: ENST00000374087.4 NCOA4-001

Description

nuclear receptor coactivator 4 [Source:HGNC Symbol;Acc:7671]

Gene Synonyms

ARA70, DKFZp762E1112, ELE1, PTC3, RFG

Location

Chromosome 10: 51,565,227-51,590,732 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 12162 variant alleles and maps to 533 oligo probes.

Gene

This transcript is a product of gene ENSG00000138293.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000452682.1	NCOA4-205	3735	650aa	ENSP00000395465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44394	Q13772	NM_001145260.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438493.1	NCOA4-203	3646	630aa	ENSP00000405146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44393	B4DZ85 Q13772	NM_001145261.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443446.1	NCOA4-204	3575	614aa	ENSP00000390713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7237	B4DZ85 Q13772	NM_001145262.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344348.6	NCOA4-003	3487	614aa	ENSP00000344552.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7237	B4DZ85 Q13772	NM_005437.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374087.4	NCOA4-001	3431	614aa	ENSP00000363200.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7237	B4DZ85 Q13772	NM_001145263.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374082.1	NCOA4-002	3293	575aa	ENSP00000363195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6TAR0 Q8NI67 Q96E88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430396.2	NCOA4-202	2124	514aa	ENSP00000393053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF87 B4DZ85	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414907.2	NCOA4-201	1755	448aa	ENSP00000411018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ85	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431200.1	NCOA4-004	792	264aa	ENSP00000400928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000498586.1	NCOA4-005	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,431 bps, Translation length: 614 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13772

CCDS

This transcript is a member of the Human CCDS set: CCDS7237

Version

ENST00000374087.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048050 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374087.4 NCOA4-001

Summary