Transcript: ENST00000492225.1 FBXO11-005

Description

F-box protein 11 [Source:HGNC Symbol;Acc:13590]

Gene Synonyms

FBX11, PRMT9, UBR6, VIT1

Location

Chromosome 2: 48,045,556-48,132,707 reverse strand.

About this transcript

This transcript has 16 exons, is associated with 53021 variant alleles and maps to 430 oligo probes.

Gene

This transcript is a product of gene ENSG00000138081.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403359.3	FBXO11-001	4055	927aa	ENSP00000384823.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54357	B5MCV6 C9IYF0 E7EP88 Q86XK2	NM_001190274.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316377.4	FBXO11-201	3933	843aa	ENSP00000323822.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1837	B5MCV6 C9IYF0 E7EP88 Q86XK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402508.1	FBXO11-008	3844	843aa	ENSP00000385398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1837	B5MCV6 C9IYF0 E7EP88 Q86XK2	NM_025133.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434523.2	FBXO11-203	2028	351aa	ENSP00000397359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUR1 B5MCV6 E7EP88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493962.2	FBXO11-006	1986	562aa	ENSP00000428118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000378314.3	FBXO11-202	591	93aa	ENSP00000367565.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MEH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424163.1	FBXO11-004	560	140aa	ENSP00000392272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405808.1	FBXO11-014	299	57aa	ENSP00000385127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434234.1	FBXO11-013	572	81aa	ENSP00000402692.1	Nonsense mediated decay		B5MCV6 E7EP88	-	-
ENST00000480038.1	FBXO11-010	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465204.1	FBXO11-007	3158	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492225.1	FBXO11-005	2216	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470899.1	FBXO11-009	908	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 0, Transcript length: 2,216 bps,

Version

ENST00000492225.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323724 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000492225.1 FBXO11-005

Summary