Transcript: ENST00000409229.3 SLC3A1-005

Description

solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:HGNC Symbol;Acc:11025]

Gene Synonyms

ATR1, CSNU1, D2H, NBAT, RBAT

Location

Chromosome 2: 44,502,675-44,542,382 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 23326 variant alleles and maps to 321 oligo probes.

Gene

This transcript is a product of gene ENSG00000138079.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260649.6	SLC3A1-001	2989	685aa	ENSP00000260649.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1819	E7ENC4 Q07837	NM_000341.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409229.3	SLC3A1-005	2909	564aa	ENSP00000386620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP2 Q4J6B5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409380.1	SLC3A1-006	2424	407aa	ENSP00000386709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENC4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409387.1	SLC3A1-002	2327	564aa	ENSP00000387308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409741.1	SLC3A1-004	1537	502aa	ENSP00000386954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4J6B6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410056.3	SLC3A1-003	1426	391aa	ENSP00000387337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4J6B8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409740.3	SLC3A1-007	1418	316aa	ENSP00000386677.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PC38	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409294.1	SLC3A1-009	792	184aa	ENSP00000386852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427285.1	SLC3A1-008	574	143aa	ENSP00000391642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,909 bps, Translation length: 564 residues

Version

ENST00000409229.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327838 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000409229.3 SLC3A1-005

Summary