Transcript: ENST00000370500.5 GTF2B-001

Description

general transcription factor IIB [Source:HGNC Symbol;Acc:4648]

Gene Synonyms

TF2B, TFIIB

Location

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 17913 variant alleles and maps to 508 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370500.5	GTF2B-001	1351	316aa	ENSP00000359531.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS715	Q00403	NM_001514.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418217.1	GTF2B-002	783	231aa	ENSP00000402345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1APE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448623.1	GTF2B-003	770	224aa	ENSP00000415741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1APE1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494819.1	GTF2B-005	893	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471296.1	GTF2B-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486078.1	GTF2B-004	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471471.1	GTF2B-007	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,351 bps, Translation length: 316 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00403

CCDS

This transcript is a member of the Human CCDS set: CCDS715

Version

ENST00000370500.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029279 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.