Transcript: ENST00000564079.1 TUBGCP4-002

Description

tubulin, gamma complex associated protein 4 [Source:HGNC Symbol;Acc:16691]

Gene Synonyms

76P, FLJ14797, GCP-4, GCP4, Grip76

Location

Chromosome 15: 43,663,313-43,699,293 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 5 domains and features, is associated with 16014 variant alleles and maps to 564 oligo probes.

Gene

This transcript is a product of gene ENSG00000137822.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564079.1	TUBGCP4-002	4122	666aa	ENSP00000456648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42030	Q9UGJ1	NM_014444.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260383.7	TUBGCP4-001	2617	667aa	ENSP00000260383.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66745	Q9UGJ1	NM_001286414.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399460.3	TUBGCP4-201	1927	342aa	ENSP00000382387.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BVR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563147.1	TUBGCP4-011	846	171aa	ENSP00000454915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNL9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565548.1	TUBGCP4-012	762	105aa	ENSP00000456550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS59	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561691.1	TUBGCP4-003	1928	397aa	ENSP00000455474.1	Nonsense mediated decay		Q9BVR6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563517.1	TUBGCP4-006	771	82aa	ENSP00000454696.1	Nonsense mediated decay		H3BN56	-	-
ENST00000563412.1	TUBGCP4-008	561	103aa	ENSP00000455993.1	Nonsense mediated decay		H3BQY4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566251.1	TUBGCP4-010	460	66aa	ENSP00000455555.1	Nonsense mediated decay		H3BQ12	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570081.1	TUBGCP4-005	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563963.1	TUBGCP4-004	4379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564511.1	TUBGCP4-007	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562053.1	TUBGCP4-009	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,122 bps, Translation length: 666 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGJ1

CCDS

This transcript is a member of the Human CCDS set: CCDS42030

Version

ENST00000564079.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432971 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000564079.1 TUBGCP4-002

Summary