Transcript: ENST00000567974.1 PARP6-008

Description

poly (ADP-ribose) polymerase family, member 6 [Source:HGNC Symbol;Acc:26921]

Gene Synonyms

ARTD17, PARP-6-B1, PARP-6-C, pART17

Location

Chromosome 15: 72,533,540-72,558,271 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 10 domains and features, is associated with 10028 variant alleles and maps to 555 oligo probes.

Gene

This transcript is a product of gene ENSG00000137817.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000569795.1	PARP6-001	2855	630aa	ENSP00000456348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10241	H3BTI3 H3BUY2 Q2NL67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000287196.9	PARP6-202	2625	630aa	ENSP00000287196.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10241	H3BTI3 H3BUY2 Q2NL67	NM_020214.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260376.7	PARP6-201	2555	518aa	ENSP00000260376.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTI3 H3BUY2 J7MDH3 Q2NL67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567974.1	PARP6-008	1950	564aa	ENSP00000455815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0PJ50	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419739.3	PARP6-010	1718	553aa	ENSP00000403265.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3B4 H3BTI3 H3BUY2 Q0VDG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566844.1	PARP6-019	829	26aa	ENSP00000457187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568360.1	PARP6-011	596	73aa	ENSP00000457862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTI3 H3BUY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569173.1	PARP6-023	516	80aa	ENSP00000456749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565443.1	PARP6-006	2305	519aa	ENSP00000456370.1	Nonsense mediated decay		H3BRR4 H3BTI3 H3BUY2	-	-
ENST00000567440.1	PARP6-003	2271	251aa	ENSP00000454298.1	Nonsense mediated decay		H3BMA3 H3BTI3 H3BUY2	-	-
ENST00000564610.1	PARP6-009	1876	451aa	ENSP00000456468.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567263.1	PARP6-021	845	124aa	ENSP00000457752.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565999.1	PARP6-016	740	76aa	ENSP00000457134.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567042.1	PARP6-012	601	17aa	ENSP00000455637.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569890.1	PARP6-022	304	73aa	ENSP00000455847.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000413097.2	PARP6-004	2750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544520.1	PARP6-005	2341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567633.1	PARP6-020	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566991.1	PARP6-002	3657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569972.1	PARP6-014	836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566831.1	PARP6-015	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568213.1	PARP6-013	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 1,950 bps, Translation length: 564 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000567974.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420084 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000567974.1 PARP6-008

Summary