Transcript: ENST00000340273.4 MMP13-002

Description

matrix metallopeptidase 13 (collagenase 3) [Source:HGNC Symbol;Acc:7159]

Gene Synonyms

CLG3, MANDP1

Location

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 5159 variant alleles and maps to 364 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260302.3	MMP13-001	2716	471aa	ENSP00000260302.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8324	P45452 Q6LBE5	NM_002427.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340273.4	MMP13-002	1470	489aa	ENSP00000339672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E971 Q6LBE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,470 bps, Translation length: 489 residues

Version

ENST00000340273.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386649 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.