Transcript: ENST00000532184.1 TRPC6-005

Description

transient receptor potential cation channel, subfamily C, member 6 [Source:HGNC Symbol;Acc:12338]

Gene Synonyms

FSGS2, TRP6

Location

Chromosome 11: 101,324,372-101,326,308 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 849 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSG00000137672.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344327.3	TRPC6-001	4612	931aa	ENSP00000340913.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8311	B3KNL3 Q9Y210	NM_004621.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532133.1	TRPC6-004	2648	853aa	ENSP00000435574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360497.4	TRPC6-003	2631	876aa	ENSP00000353687.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y210	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348423.4	TRPC6-002	2448	815aa	ENSP00000343672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y210	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526713.1	TRPC6-007	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532184.1	TRPC6-005	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527240.1	TRPC6-006	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 645 bps,

Version

ENST00000532184.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394774 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000532184.1 TRPC6-005

Summary