Transcript: ENST00000260197.7 SORL1-001

Description

sortilin-related receptor, L(DLR class) A repeats containing [Source:HGNC Symbol;Acc:11185]

Gene Synonyms

C11orf32, LR11, LRP9, SORLA, SorLA, SorLA-1, gp250

Location

Chromosome 11: 121,322,912-121,504,402 forward strand.

About this transcript

This transcript has 48 exons, is annotated with 120 domains and features, is associated with 74252 variant alleles and maps to 1452 oligo probes.

Gene

This transcript is a product of gene ENSG00000137642.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260197.7	SORL1-001	10904	2214aa	ENSP00000260197.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8436	E9PPB3 E9PS32 Q92673	NM_003105.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525532.1	SORL1-003	3836	1158aa	ENSP00000434634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPB3 E9PS32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532694.1	SORL1-004	3692	1060aa	ENSP00000432131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534286.1	SORL1-005	3501	1124aa	ENSP00000436447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP43 E9PS32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527934.1	SORL1-006	3032	829aa	ENSP00000435405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKB0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532451.1	SORL1-002	2165	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528339.1	SORL1-009	3703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534754.1	SORL1-010	2222	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527649.1	SORL1-012	1765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524633.1	SORL1-011	1338	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530365.1	SORL1-013	983	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529445.1	SORL1-007	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524873.1	SORL1-008	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 10,904 bps, Translation length: 2,214 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92673

CCDS

This transcript is a member of the Human CCDS set: CCDS8436

Version

ENST00000260197.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387626 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000260197.7 SORL1-001

Summary