Transcript: ENST00000373299.1 STXBP1-002

Description

syntaxin binding protein 1 [Source:HGNC Symbol;Acc:11444]

Gene Synonyms

MUNC18-1, NSEC1, P67, RBSEC1, STXBP1, UNC18, UNC18A, hUNC18, rbSec1

Location

About this transcript

This transcript has 19 exons, is annotated with 14 domains and features, is associated with 32758 variant alleles and maps to 648 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373302.3	STXBP1-001	3909	603aa	ENSP00000362399.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6874	P61764	NM_003165.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373299.1	STXBP1-002	3759	594aa	ENSP00000362396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35146	P61764 Q59GC9 Q68CM6	NM_001032221.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481942.1	STXBP1-004	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496504.1	STXBP1-003	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494254.1	STXBP1-005	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476182.1	STXBP1-006	241	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495829.1	STXBP1-007	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,759 bps, Translation length: 594 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61764

CCDS

This transcript is a member of the Human CCDS set: CCDS35146

Version

ENST00000373299.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054229 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.