Description
sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) [Source:HGNC Symbol;Acc:32949]
Gene Synonyms
FLJ20297, FLJ20756, KIAA1418, NET13, NSMASE-3, NSMASE3, nSMase-3
Location
Chromosome 2: 130,908,982-130,940,323 reverse strand.
About this transcript
This transcript has 20 exons, is annotated with 8 domains and features, is associated with 15740 variant alleles and maps to 1164 oligo probes.
Gene
This transcript is a product of gene ENSG00000136699.15 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000409031.1 | SMPD4-001 | 4896 | 866aa | ENSP00000386531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42751 | B1PBA3 C9J647 | NM_017951.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000431183.2 | SMPD4-203 | 4590 | 764aa | ENSP00000405187.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54398 | B4DWK7 Q9NXE4 | NM_001171083.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000351288.6 | SMPD4-002 | 3661 | 837aa | ENSP00000259217.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2156 | B4DWK7 C9J647 H7BXF4 | NM_017751.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000439886.1 | SMPD4-004 | 3371 | 741aa | ENSP00000401648.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000453750.1 | SMPD4-206 | 2994 | 615aa | ENSP00000394313.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DM23 B4DWK7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000339679.7 | SMPD4-201 | 2723 | 724aa | ENSP00000339721.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DWK7 G8JLC4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000443958.2 | SMPD4-204 | 2350 | 530aa | ENSP00000391896.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DWK7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000452225.2 | SMPD4-205 | 2342 | 607aa | ENSP00000387762.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DQ31 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000426662.2 | SMPD4-202 | 1861 | 502aa | ENSP00000397479.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E0L6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000457039.2 | SMPD4-014 | 940 | 313aa | ENSP00000397078.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0W5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000430682.1 | SMPD4-015 | 820 | 274aa | ENSP00000406325.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000451542.1 | SMPD4-016 | 796 | 265aa | ENSP00000405363.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2E2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000441135.1 | SMPD4-020 | 699 | 135aa | ENSP00000406458.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J647 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449159.1 | SMPD4-009 | 635 | 211aa | ENSP00000403915.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C235 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000412570.1 | SMPD4-013 | 3601 | 57aa | ENSP00000403002.1 | Nonsense mediated decay | F2Z2W5 | - | - | |
| ENST00000454468.1 | SMPD4-011 | 3583 | 50aa | ENSP00000407591.1 | Nonsense mediated decay | F8WF03 | - | - | |
| ENST00000433118.1 | SMPD4-012 | 3335 | 56aa | ENSP00000397278.1 | Nonsense mediated decay | F2Z2I0 | - | - | |
| ENST00000435455.1 | SMPD4-010 | 842 | 88aa | ENSP00000393791.1 | Nonsense mediated decay | F8WEQ5 | - | - | |
| ENST00000439029.1 | SMPD4-019 | 566 | 56aa | ENSP00000416208.1 | Nonsense mediated decay | F2Z2I0 | - | - | |
| ENST00000473720.1 | SMPD4-017 | 555 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000455548.2 | SMPD4-018 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482171.1 | SMPD4-005 | 4298 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491128.1 | SMPD4-006 | 2570 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461187.1 | SMPD4-008 | 659 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491319.2 | SMPD4-007 | 593 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |