Transcript: ENST00000472292.1 IL1RN-009

Description

interleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:6000]

Gene Synonyms

DIRA, ICIL-1RA, IL-1RN, IL-1ra, IL-1ra3, IL1F3, IL1RA, IRAP, MGC10430, MVCD4

Location

Chromosome 2: 113,885,153-113,887,559 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1181 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000136689.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259206.5	IL1RN-001	1810	180aa	ENSP00000259206.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2114	P18510 Q9UP87	NM_173841.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361779.3	IL1RN-003	1922	143aa	ENSP00000354816.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2115	P18510	NM_173843.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409052.1	IL1RN-004	1903	143aa	ENSP00000387210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2115	P18510	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354115.2	IL1RN-002	1747	159aa	ENSP00000329072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2113	P18510	NM_000577.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409930.3	IL1RN-005	848	177aa	ENSP00000387173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46396	P18510	NM_173842.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465812.1	IL1RN-007	500	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463073.1	IL1RN-006	385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486167.1	IL1RN-008	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472292.1	IL1RN-009	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000472292.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330806 (version 1)

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Transcript: ENST00000472292.1 IL1RN-009

Summary