Transcript: ENST00000560440.1 IREB2-002

Description

iron-responsive element binding protein 2 [Source:HGNC Symbol;Acc:6115]

Gene Synonyms

ACO3, IRP2, IRP2AD

Location

Chromosome 15: 78,730,626-78,769,042 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 16809 variant alleles and maps to 456 oligo probes.

Gene

This transcript is a product of gene ENSG00000136381.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258886.8	IREB2-001	6354	963aa	ENSP00000258886.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10302	H0YLE0 P48200	NM_004136.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560440.1	IREB2-002	4396	343aa	ENSP00000452938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKU0 H0YLE0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560840.1	IREB2-004	558	38aa	ENSP00000453172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559091.1	IREB2-009	268	89aa	ENSP00000453863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558570.1	IREB2-003	2917	220aa	ENSP00000454063.1	Nonsense mediated decay		H0YLE0 H0YNL8	-	-
ENST00000558525.1	IREB2-008	865	51aa	ENSP00000453058.1	Nonsense mediated decay		H0YL48	-	-
ENST00000559215.1	IREB2-006	572	46aa	ENSP00000453532.1	Nonsense mediated decay		H0YMA8	-	-
ENST00000559427.1	IREB2-007	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560454.1	IREB2-005	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559676.1	IREB2-010	973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,396 bps, Translation length: 343 residues

Version

ENST00000560440.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419099 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000560440.1 IREB2-002

Summary