Transcript: ENST00000546983.1 NKX2-1-005

Description

NK2 homeobox 1 [Source:HGNC Symbol;Acc:11825]

Gene Synonyms

BCH, BHC, NK-2, NKX2.1, NKX2A, TEBP, TITF1, TTF-1, TTF1

Location

About this transcript

This transcript has 3 exons, is associated with 1007 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000518149.1	NKX2-1-004	2583	371aa	ENSP00000428341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9659	P43699	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498187.2	NKX2-1-001	2330	371aa	ENSP00000429607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9659	P43699	NM_003317.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354822.5	NKX2-1-002	2186	401aa	ENSP00000346879.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41945	P43699 Q13306	NM_001079668.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522719.2	NKX2-1-003	1417	371aa	ENSP00000429519.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9659	P43699	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546983.1	NKX2-1-005	653	34aa	ENSP00000449302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VVG2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 653 bps, Translation length: 34 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000546983.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409561 (version 1)