Transcript: ENST00000406575.1 IL6-006

Description

interleukin 6 (interferon, beta 2) [Source:HGNC Symbol;Acc:6018]

Gene Synonyms

BSF2, HGF, HSF, IFNB2, IL-6

Location

Chromosome 7: 22,766,859-22,769,434 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 1436 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000136244.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000404625.1	IL6-001	1527	212aa	ENSP00000385675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5375	B5MC21 C9J5B0 H9C875 P05231 Q75MH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420258.2	IL6-202	1493	252aa	ENSP00000405994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNQ5 B4DNV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258743.5	IL6-201	1170	212aa	ENSP00000258743.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5375	B5MC21 C9J5B0 H9C875 P05231 Q75MH2	NM_000600.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407492.1	IL6-004	926	136aa	ENSP00000385043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401630.3	IL6-005	765	189aa	ENSP00000384928.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC21 B5MCZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406575.1	IL6-006	649	198aa	ENSP00000385227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNV3 B5MC14 C9J5B0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426291.1	IL6-002	574	152aa	ENSP00000405150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5B0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000401651.1	IL6-003	539	122aa	ENSP00000385718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485300.1	IL6-008	985	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464710.1	IL6-007	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 649 bps, Translation length: 198 residues

Version

ENST00000406575.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320077 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000406575.1 IL6-006

Summary