Transcript: ENST00000381990.2 GPNMB-002

Description

glycoprotein (transmembrane) nmb [Source:HGNC Symbol;Acc:4462]

Gene Synonyms

HGFIN, NMB

Location

Chromosome 7: 23,286,316-23,314,726 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 12335 variant alleles and maps to 574 oligo probes.

Gene

This transcript is a product of gene ENSG00000136235.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258733.4	GPNMB-001	2862	560aa	ENSP00000258733.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5380	B4DZS5 Q14956	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381990.2	GPNMB-002	2763	572aa	ENSP00000371420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34610	Q14956	NM_002510.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453162.2	GPNMB-201	2155	514aa	ENSP00000405586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY20	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539136.1	GPNMB-202	1879	461aa	ENSP00000445266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZS5 F6SKP1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409458.3	GPNMB-007	1673	206aa	ENSP00000386476.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96F58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478451.1	GPNMB-010	862	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465673.1	GPNMB-013	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492858.2	GPNMB-014	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459927.1	GPNMB-003	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487890.1	GPNMB-006	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470994.1	GPNMB-012	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474157.1	GPNMB-004	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463011.1	GPNMB-009	378	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468723.1	GPNMB-011	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479625.1	GPNMB-008	788	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492512.1	GPNMB-005	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,763 bps, Translation length: 572 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14956

CCDS

This transcript is a member of the Human CCDS set: CCDS34610

Version

ENST00000381990.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327152 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381990.2 GPNMB-002

Summary