Transcript: ENST00000258538.3 SLC41A2-001

Description

solute carrier family 41 (magnesium transporter), member 2 [Source:HGNC Symbol;Acc:31045]

Gene Synonyms

DKFZP434K0427, SLC41A1-L1

Location

Chromosome 12: 105,196,331-105,322,433 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 48787 variant alleles and maps to 654 oligo probes.

Gene

This transcript is a product of gene ENSG00000136052.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258538.3	SLC41A2-001	4449	573aa	ENSP00000258538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9100	C9JA64 C9JCR2 C9JDQ2 C9JIL4 C9JKF2 C9JYJ7 Q96JW4	NM_032148.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415674.1	SLC41A2-008	702	143aa	ENSP00000396429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA64 C9JCR2 C9JDQ2 C9JIL4 C9JKF2 C9JYJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433540.1	SLC41A2-005	685	76aa	ENSP00000395550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA64 C9JDQ2 C9JIL4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424946.1	SLC41A2-007	590	72aa	ENSP00000397315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA64 C9JDQ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449866.2	SLC41A2-003	574	94aa	ENSP00000414526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA64 C9JDQ2 C9JIL4 C9JKF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000411411.1	SLC41A2-009	571	122aa	ENSP00000407898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA64 C9JDQ2 C9JIL4 C9JKF2 C9JYJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432951.1	SLC41A2-006	564	12aa	ENSP00000410625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417469.2	SLC41A2-004	563	46aa	ENSP00000396297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDQ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437220.1	SLC41A2-002	447	149aa	ENSP00000391377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000549713.1	SLC41A2-010	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,449 bps, Translation length: 573 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JW4

CCDS

This transcript is a member of the Human CCDS set: CCDS9100

Version

ENST00000258538.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346850 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000258538.3 SLC41A2-001

Summary