Transcript: ENST00000411688.1 CYP27A1-005

Description

cytochrome P450, family 27, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2605]

Gene Synonyms

CP27, CTX, CYP27

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 3352 variant alleles and maps to 125 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258415.4	CYP27A1-001	2286	531aa	ENSP00000258415.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2423	C9J1K5 Q02318	NM_000784.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411688.1	CYP27A1-005	799	221aa	ENSP00000392671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1K5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445971.1	CYP27A1-004	903	115aa	ENSP00000404945.1	Nonsense mediated decay		F8WD90	-	-
ENST00000494263.1	CYP27A1-002	2566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466602.1	CYP27A1-003	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 799 bps, Translation length: 221 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000411688.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336560 (version 2)