Transcript: ENST00000537252.1 PRPH-007

Description

peripherin [Source:HGNC Symbol;Acc:9461]

Gene Synonyms

NEF4, PRPH1

Location

About this transcript

This transcript has 3 exons, is associated with 626 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257860.4	PRPH-001	3241	470aa	ENSP00000257860.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8783	P41219	NM_006262.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532332.2	PRPH-004	840	200aa	ENSP00000437182.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451891.4	PRPH-002	704	207aa	ENSP00000408897.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W835	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551194.1	PRPH-008	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533401.1	PRPH-006	946	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530631.1	PRPH-003	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537252.1	PRPH-007	630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 630 bps,

Version

ENST00000537252.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398094 (version 1)