Transcript: ENST00000392708.4 STT3A-001

Description

STT3A, subunit of the oligosaccharyltransferase complex (catalytic) [Source:HGNC Symbol;Acc:6172]

Gene Synonyms

ITM1, MGC9042, STT3-A, TMC

Location

Chromosome 11: 125,462,690-125,492,986 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 16 domains and features, is associated with 12298 variant alleles and maps to 624 oligo probes.

Gene

This transcript is a product of gene ENSG00000134910.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392708.4	STT3A-001	4558	705aa	ENSP00000376472.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8458	E9PI32 E9PIJ8 E9PN73 E9PNQ1 P46977	NM_152713.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529196.1	STT3A-002	2402	705aa	ENSP00000436962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8458	E9PI32 E9PIJ8 E9PN73 E9PNQ1 P46977	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531491.1	STT3A-003	2160	613aa	ENSP00000432820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60998	E9PNQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525652.1	STT3A-005	607	102aa	ENSP00000435810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526726.1	STT3A-016	582	194aa	ENSP00000436523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000527606.1	STT3A-006	569	119aa	ENSP00000436558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI32 E9PIJ8 E9PN73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529886.1	STT3A-007	542	117aa	ENSP00000432912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIJ8 E9PN73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526364.1	STT3A-014	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527456.1	STT3A-009	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531001.1	STT3A-011	325	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534472.1	STT3A-004	1561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525946.1	STT3A-013	1383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531599.1	STT3A-015	973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524639.1	STT3A-012	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526213.1	STT3A-008	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525431.1	STT3A-010	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,558 bps, Translation length: 705 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46977

CCDS

This transcript is a member of the Human CCDS set: CCDS8458

Version

ENST00000392708.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386689 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392708.4 STT3A-001

Summary