Transcript: ENST00000472247.1 ERCC5-005

Description

excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:HGNC Symbol;Acc:3437]

Gene Synonyms

COFS3, ERCM2, UVDR, XPG, XPGC

Location

About this transcript

This transcript has 2 exons, is associated with 863 variant alleles and maps to 268 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355739.4	ERCC5-001	5076	1186aa	ENSP00000347978.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32004	P28715	NM_000123.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375954.1	ERCC5-006	2986	419aa	ENSP00000365121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P28715	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535557.1	ERCC5-201	1142	232aa	ENSP00000442117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HD60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472151.1	ERCC5-002	635	43aa	ENSP00000436083.1	Nonsense mediated decay		F2Z2A1	-	-
ENST00000472247.1	ERCC5-005	710	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481099.1	ERCC5-004	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000375958.3	ERCC5-003	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 710 bps,

Version

ENST00000472247.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000045712 (version 1)