Transcript: ENST00000360467.5 COL4A2-001

Description

collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203]

Gene Synonyms

DKFZp686I14213, FLJ22259, ICH, POREN2

Location

Chromosome 13: 110,959,614-111,165,374 forward strand.

About this transcript

This transcript has 48 exons, is annotated with 54 domains and features, is associated with 97512 variant alleles and maps to 1635 oligo probes.

Gene

This transcript is a product of gene ENSG00000134871.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360467.5	COL4A2-001	6281	1712aa	ENSP00000353654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41907	A2A352 P08572	NM_001846.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400163.2	COL4A2-004	491	105aa	ENSP00000383027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A352	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462309.1	COL4A2-006	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483683.1	COL4A2-008	686	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463084.1	COL4A2-003	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480771.1	COL4A2-005	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480609.1	COL4A2-009	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494852.1	COL4A2-002	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478681.1	COL4A2-007	337	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 48, Coding exons: 47, Transcript length: 6,281 bps, Translation length: 1,712 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08572

CCDS

This transcript is a member of the Human CCDS set: CCDS41907

Version

ENST00000360467.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045761 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000360467.5 COL4A2-001

Summary