Transcript: ENST00000514070.1 TMEM165-005

Description

transmembrane protein 165 [Source:HGNC Symbol;Acc:30760]

Gene Synonyms

CDG2K, FT27, GDT1, TMPT27, TPARL

Location

Chromosome 4: 56,262,418-56,263,572 forward strand.

About this transcript

This transcript has 2 exons, is associated with 598 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000134851.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381334.5	TMEM165-001	1928	324aa	ENSP00000370736.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3499	Q9HC07	NM_018475.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542052.1	TMEM165-201	1657	261aa	ENSP00000437816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608091.1	TMEM165-013	1567	158aa	ENSP00000476531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506198.1	TMEM165-006	828	129aa	ENSP00000425449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508404.1	TMEM165-002	1657	76aa	ENSP00000422639.1	Nonsense mediated decay		D6RBL0	-	-
ENST00000506103.2	TMEM165-012	572	27aa	ENSP00000476621.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514904.1	TMEM165-003	1522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508561.1	TMEM165-009	756	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511710.1	TMEM165-007	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514070.1	TMEM165-005	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515591.1	TMEM165-004	1786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502797.1	TMEM165-008	639	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509575.1	TMEM165-010	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 433 bps,

Version

ENST00000514070.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361624 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000514070.1 TMEM165-005

Summary