Transcript: ENST00000378623.1 LRP4-001

Description

low density lipoprotein receptor-related protein 4 [Source:HGNC Symbol;Acc:6696]

Gene Synonyms

CLSS, KIAA0816, LRP-4, LRP10, MEGF7, SOST2

Location

About this transcript

This transcript has 38 exons, is annotated with 159 domains and features, is associated with 26980 variant alleles and maps to 1003 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378623.1	LRP4-001	8076	1905aa	ENSP00000367888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31478	O75096	NM_002334.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534404.1	LRP4-003	663	133aa	ENSP00000434763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNJ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529604.1	LRP4-002	2774	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527656.1	LRP4-005	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529921.1	LRP4-004	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 38, Coding exons: 38, Transcript length: 8,076 bps, Translation length: 1,905 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75096

CCDS

This transcript is a member of the Human CCDS set: CCDS31478

Version

ENST00000378623.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391133 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.