Transcript: ENST00000430553.2 LDHA-010

Description

lactate dehydrogenase A [Source:HGNC Symbol;Acc:6535]

Gene Synonyms

GSD11, HEL-S-133P, LDH1, LDHM

Location

Chromosome 11: 18,416,109-18,429,214 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 6904 variant alleles and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSG00000134333.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422447.3	LDHA-001	2416	332aa	ENSP00000395337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7839	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	NM_005566.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540430.1	LDHA-201	2305	361aa	ENSP00000445175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53609	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	NM_001165414.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379412.5	LDHA-005	1922	332aa	ENSP00000368722.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7839	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000227157.4	LDHA-003	1887	241aa	ENSP00000227157.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53611	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	NM_001165416.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396222.2	LDHA-002	1766	274aa	ENSP00000379524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53610	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	NM_001165415.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430553.2	LDHA-010	1310	274aa	ENSP00000406172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44549	F5GZQ4 F5H8H6 P00338	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542179.1	LDHA-020	1288	332aa	ENSP00000445331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7839	F5GXH2 F5GXY2 F5GZQ4 F5H8H6 P00338	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478970.2	LDHA-009	732	144aa	ENSP00000441241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXH2 F5GYU2 F5GZQ4 F5H8H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495052.1	LDHA-004	682	114aa	ENSP00000446415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXH2 F5GZQ4 F5H8H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543445.1	LDHA-013	576	156aa	ENSP00000440161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXH2 F5GXY2 F5GZQ4 F5H8H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535451.1	LDHA-014	465	72aa	ENSP00000444292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZQ4 F5H8H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545215.1	LDHA-011	1340	45aa	ENSP00000442637.1	Nonsense mediated decay		F5GWW2 F5H8H6	-	-
ENST00000486690.2	LDHA-017	664	45aa	ENSP00000441699.1	Nonsense mediated decay		F5GWW2 F5H8H6	-	-
ENST00000541097.1	LDHA-019	582	89aa	ENSP00000443362.1	Nonsense mediated decay		F5GZQ4 F5H5J4 F5H8H6	-	-
ENST00000545467.1	LDHA-018	570	42aa	ENSP00000443545.1	Nonsense mediated decay		F5H8H6	-	-
ENST00000539814.1	LDHA-016	556	94aa	ENSP00000442979.1	Nonsense mediated decay		F5GZQ4 F5H6W8 F5H8H6	-	-
ENST00000543695.1	LDHA-015	554	46aa	ENSP00000440368.1	Nonsense mediated decay		F5GXU1	-	-
ENST00000536528.1	LDHA-021	516	45aa	ENSP00000441058.1	Nonsense mediated decay		F5GXC7 F5H8H6	-	-
ENST00000375710.3	LDHA-023	2169	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537296.1	LDHA-022	1511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538451.1	LDHA-024	1345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494573.2	LDHA-007	1154	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460405.1	LDHA-008	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469976.2	LDHA-006	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,310 bps, Translation length: 274 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00338

CCDS

This transcript is a member of the Human CCDS set: CCDS44549

Version

ENST00000430553.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395878 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000430553.2 LDHA-010

Summary