Transcript: ENST00000256429.3 MBD2-001

Description

methyl-CpG binding domain protein 2 [Source:HGNC Symbol;Acc:6917]

Gene Synonyms

DMTase, NY-CO-41

Location

About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 30042 variant alleles and maps to 451 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256429.3	MBD2-001	4080	411aa	ENSP00000256429.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11953	O60535 Q69YZ5 Q9UBB5	NM_003927.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398398.2	MBD2-005	1237	241aa	ENSP00000381435.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583046.1	MBD2-002	1182	302aa	ENSP00000464554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45871	Q9UBB5	NM_015832.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578272.1	MBD2-003	701	72aa	ENSP00000462393.1	Nonsense mediated decay		J3KSA7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000579025.1	MBD2-004	241	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,080 bps, Translation length: 411 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBB5

CCDS

This transcript is a member of the Human CCDS set: CCDS11953

Version

ENST00000256429.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256003 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.