Transcript: ENST00000378743.3 ZFC3H1-001

Description

zinc finger, C3H1-type containing [Source:HGNC Symbol;Acc:28328]

Gene Synonyms

CCDC131, KIAA0546, MGC23401, PSRC2

Location

Chromosome 12: 72,003,252-72,057,749 reverse strand.

About this transcript

This transcript has 35 exons, is annotated with 37 domains and features, is associated with 24149 variant alleles and maps to 1083 oligo probes.

Gene

This transcript is a product of gene ENSG00000133858.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378743.3	ZFC3H1-001	7285	1989aa	ENSP00000368017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41813	O60293	NM_144982.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548100.1	ZFC3H1-003	1771	346aa	ENSP00000450044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60293	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552037.1	ZFC3H1-002	1484	358aa	ENSP00000447976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1X1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552994.1	ZFC3H1-004	7597	1910aa	ENSP00000446995.1	Nonsense mediated decay		O60293	-	-
ENST00000549407.1	ZFC3H1-005	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550712.1	ZFC3H1-006	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550963.1	ZFC3H1-012	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000551487.1	ZFC3H1-010	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546475.1	ZFC3H1-009	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546606.1	ZFC3H1-007	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547398.1	ZFC3H1-011	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546771.1	ZFC3H1-008	381	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 7,285 bps, Translation length: 1,989 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60293

CCDS

This transcript is a member of the Human CCDS set: CCDS41813

Version

ENST00000378743.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404751 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378743.3 ZFC3H1-001

Summary