Transcript: ENST00000318950.6 SWAP70-001

Description

SWAP switching B-cell complex 70kDa subunit [Source:HGNC Symbol;Acc:17070]

Gene Synonyms

KIAA0640, SWAP-70

Location

Chromosome 11: 9,685,624-9,774,538 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 40828 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000133789.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318950.6	SWAP70-001	4882	585aa	ENSP00000315630.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31426	E9PJM7 Q9UH65	NM_015055.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447399.2	SWAP70-002	3538	527aa	ENSP00000399056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMB1 E9PJM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534662.1	SWAP70-006	1131	226aa	ENSP00000435587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534562.1	SWAP70-007	977	23aa	ENSP00000433824.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526358.1	SWAP70-004	813	149aa	ENSP00000431768.1	Nonsense mediated decay		E9PJK8	-	-
ENST00000524817.1	SWAP70-003	3006	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531814.1	SWAP70-005	716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,882 bps, Translation length: 585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UH65

CCDS

This transcript is a member of the Human CCDS set: CCDS31426

Version

ENST00000318950.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386766 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000318950.6 SWAP70-001

Summary