Transcript: ENST00000439040.1 ATP13A3-001

Description

ATPase type 13A3 [Source:HGNC Symbol;Acc:24113]

Gene Synonyms

AFURS1

Location

Chromosome 3: 194,123,401-194,219,093 reverse strand.

About this transcript

This transcript has 33 exons, is annotated with 42 domains and features, is associated with 42003 variant alleles and maps to 1047 oligo probes.

Gene

This transcript is a product of gene ENSG00000133657.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439040.1	ATP13A3-001	7720	1226aa	ENSP00000416508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43187	C9J7Z7 C9JAP7 Q9H7F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256031.4	ATP13A3-201	7322	1226aa	ENSP00000256031.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43187	C9J7Z7 C9JAP7 Q9H7F0	NM_024524.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429136.1	ATP13A3-010	3729	162aa	ENSP00000402550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000446356.1	ATP13A3-003	542	46aa	ENSP00000410767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457986.1	ATP13A3-004	490	102aa	ENSP00000406234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7Z7 C9JAP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461660.1	ATP13A3-011	3517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492983.1	ATP13A3-005	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485194.1	ATP13A3-006	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497567.1	ATP13A3-012	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484023.1	ATP13A3-007	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 33, Coding exons: 31, Transcript length: 7,720 bps, Translation length: 1,226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H7F0

CCDS

This transcript is a member of the Human CCDS set: CCDS43187

Version

ENST00000439040.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000342799 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439040.1 ATP13A3-001

Summary