Transcript: ENST00000397110.2 C1QTNF6-001

Description

C1q and tumor necrosis factor related protein 6 [Source:HGNC Symbol;Acc:14343]

Gene Synonyms

CTFP6, CTRP6, ZACRP6

Location

Chromosome 22: 37,576,207-37,584,326 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 3955 variant alleles and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSG00000133466.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337843.2	C1QTNF6-004	2934	278aa	ENSP00000338812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13943	Q9BXI9	NM_031910.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397110.2	C1QTNF6-001	1647	278aa	ENSP00000380299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13943	Q9BXI9	NM_182486.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000255836.6	C1QTNF6-201	563	154aa	ENSP00000255836.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434784.1	C1QTNF6-003	975	116aa	ENSP00000399243.1	Nonsense mediated decay		F8WC87	-	-
ENST00000470655.1	C1QTNF6-002	5003	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497071.1	C1QTNF6-006	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467564.1	C1QTNF6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493023.1	C1QTNF6-005	3296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,647 bps, Translation length: 278 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXI9

CCDS

This transcript is a member of the Human CCDS set: CCDS13943

Version

ENST00000397110.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318804 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397110.2 C1QTNF6-001

Summary