Transcript: ENST00000255681.6 MACROD1-001

Description

MACRO domain containing 1 [Source:HGNC Symbol;Acc:29598]

Gene Synonyms

LRP16

Location

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 75625 variant alleles and maps to 383 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255681.6	MACROD1-001	1205	325aa	ENSP00000255681.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8056	Q9BQ69	NM_014067.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538595.1	MACROD1-002	868	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542359.1	MACROD1-005	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543422.1	MACROD1-006	403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538042.1	MACROD1-007	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541041.1	MACROD1-008	230	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545464.1	MACROD1-004	899	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542105.1	MACROD1-003	431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,205 bps, Translation length: 325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ69

CCDS

This transcript is a member of the Human CCDS set: CCDS8056

Version

ENST00000255681.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396570 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.