Transcript: ENST00000423345.4 PRAM1-001

Description

PML-RARA regulated adaptor molecule 1 [Source:HGNC Symbol;Acc:30091]

Gene Synonyms

PML-RAR, PRAM-1

Location

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 7250 variant alleles and maps to 340 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000423345.4	PRAM1-001	2667	670aa	ENSP00000408342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45954	Q96QH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000255612.3	PRAM1-201	2162	669aa	ENSP00000255612.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K4DI84	NM_032152.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600262.1	PRAM1-004	583	180aa	ENSP00000471634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R149	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594696.1	PRAM1-002	1407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599698.1	PRAM1-003	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,667 bps, Translation length: 670 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96QH2

CCDS

This transcript is a member of the Human CCDS set: CCDS45954

Version

ENST00000423345.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000397040 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.