Transcript: ENST00000255078.3 IGHMBP2-001

Description

immunoglobulin mu binding protein 2 [Source:HGNC Symbol;Acc:5542]

Gene Synonyms

CATF1, HCSA, HMN6, SMARD1, SMBP2, SMUBP2, ZFAND7

Location

Chromosome 11: 68,671,310-68,708,067 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 30 domains and features, is associated with 17779 variant alleles and maps to 676 oligo probes.

Gene

This transcript is a product of gene ENSG00000132740.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255078.3	IGHMBP2-001	3961	993aa	ENSP00000255078.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8187	F5H5K3 P38935	NM_002180.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539224.1	IGHMBP2-007	785	192aa	ENSP00000440465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX64 F5H5K3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544541.1	IGHMBP2-006	479	29aa	ENSP00000443343.1	Nonsense mediated decay		F5H5K3	-	-
ENST00000545146.1	IGHMBP2-005	477	91aa	ENSP00000456366.1	Nonsense mediated decay		F5H5K3 H3BRR1	-	-
ENST00000541229.1	IGHMBP2-010	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568742.1	IGHMBP2-012	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536803.1	IGHMBP2-009	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543739.1	IGHMBP2-004	2846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539064.1	IGHMBP2-002	2346	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544521.1	IGHMBP2-003	1683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537458.1	IGHMBP2-008	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545475.1	IGHMBP2-011	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,961 bps, Translation length: 993 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38935

CCDS

This transcript is a member of the Human CCDS set: CCDS8187

Version

ENST00000255078.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396862 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000255078.3 IGHMBP2-001

Summary